Genome REsources

Comparative genomics in the Macrosiphini

We’ve sequenced and assembled genomes for aphid species in the tribe Macrosiphini as part of our research:

  • Glasshouse-potato (foxglove) aphid (Aulacorthum solani) Reference genome: GCA_042834665.1, Illumina corrected nanopore

  • Potato aphid (Macrosiphum euphorbiae) strain ME57: ASM3084954v1, Illumina corrected nanopore

  • Varicolored snakeroot aphid (Uroleucon eupatorifoliae) Reference genome: pending (contact us for a draft assembly), Nanopore

  • Crescent-marked lily aphid (Neomyzus circumflexus) Reference genome: pending (contact us for a draft assembly), Nanopore

  • Mugwort aphid (Macrosiphoniella artemisiae) Reference genome: pending (contact us for a draft assembly), Nanopore

Aphid bacterial symbionts

Genome sequence of an aphid-associated strain of Rickettsia sp.: Pending (contact us for a draft assembly), Illumina corrected nanopore

Entomopathogens

New species of viruses

Reference genome of Pandora neoaphidis: pending (contact us for a draft assembly), PacBio + Nanopore with Hi-C scaffolding

Illinoia liriodendri Iflavirus (IspV): PV023937

Uroleucon eupatarifoliae virus (UeV): PV023938

Uroleucon iflavirus (UspV): PV023939

Photinus pyralis iflavirus 1 (PPIV1): PQ438176

Photinus pyralis associated partiti-like virus, segment 1: PQ438177 & segment 2: PQ438178

Zoophthora radicans mitovirus 1: PQ606655